Species_Base Member List

This is the complete list of members for Species_Base, including all inherited members.

addCohort()=0	Species_Base	pure virtual
addCohort(T bc)	Species_Base
bfin_is_u0in	Species_Base
birth_flux_in	Species_Base
birth_flux_out_history	Species_Base	protected
birthRate(int i, double x, double t, void *env)=0	Species_Base	pure virtual
calc_boundary_u(double gb, double pe)=0	Species_Base	pure virtual
copyCohortsExtraToState(std::vector< double >::iterator &it)=0	Species_Base	pure virtual
copyExtraStateToCohorts(std::vector< double >::iterator &it)=0	Species_Base	pure virtual
establishmentProbability(double t, void *env)=0	Species_Base	pure virtual
get_boundary_u()=0	Species_Base	pure virtual
get_maxSize()=0	Species_Base	pure virtual
getExtraRates(std::vector< double >::iterator &it)=0	Species_Base	pure virtual
getU(int i)=0	Species_Base	pure virtual
getX(int i)=0	Species_Base	pure virtual
growthRate(int i, double x, double t, void *env)=0	Species_Base	pure virtual
growthRateGradient(int i, double x, double t, void *env, double grad_dx)=0	Species_Base	pure virtual
growthRateGradientCentered(int i, double xplus, double xminus, double t, void *env)=0	Species_Base	pure virtual
growthRateOffset(int i, double x, double t, void *env)=0	Species_Base	pure virtual
h	Species_Base	protected
init_density(int i, double x, void *env)=0	Species_Base	pure virtual
initAndCopyExtraState(double t, void *env, std::vector< double >::iterator &it)=0	Species_Base	pure virtual
initBoundaryCohort(double t, void *env)=0	Species_Base	pure virtual
is_resident	Species_Base
J	Species_Base	protected
mortalityRate(int i, double x, double t, void *env)=0	Species_Base	pure virtual
mortalityRateGradient(int i, double x, double t, void *env, double grad_dx)=0	Species_Base	pure virtual
n_extra_statevars	Species_Base	protected
print()=0	Species_Base	pure virtual
removeDeadCohorts(double ucut)=0	Species_Base	pure virtual
removeDenseCohorts(double dxcut)=0	Species_Base	pure virtual
removeDensestCohort()=0	Species_Base	pure virtual
resize(int _J)=0	Species_Base	pure virtual
schedule	Species_Base	protected
set_bfin_is_u0in(bool flag)	Species_Base
set_birthTime(int i, double t0)=0	Species_Base	pure virtual
set_inputBirthFlux(double b)	Species_Base
set_ub(double _ub)=0	Species_Base	pure virtual
set_xb(double _xb)=0	Species_Base	pure virtual
setU(int i, double _u)=0	Species_Base	pure virtual
setX(int i, double _x)=0	Species_Base	pure virtual
size()	Species_Base
Solver class	Species_Base	friend
triggerPreCompute()=0	Species_Base	pure virtual
x	Species_Base	protected
X	Species_Base	protected
xb	Species_Base
xsize()	Species_Base
~Species_Base()=0	Species_Base	pure virtual